Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs836819 | chr5:79947763 | G/A | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs836820 | chr5:79946380 | A/G | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs836822 | chr5:79943776 | C/G | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs836823 | chr5:79943714 | A/T | 7.92E-5 | 214 | 18 | 14.85 | 9.77 | KM Plot |
KIRP | rs844370 | chr5:79943002 | T/G | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs850763 | chr1:48708228 | G/T | 0.000674 | 214 | 14.68 | 19.95 | 4.37 | KM Plot |
KIRP | rs860717 | chr5:79947516 | A/C | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs861373 | chr5:79948062 | T/G | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs863215 | chr5:79948005 | C/T | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs864133 | chr5:79942207 | A/T | 0.000105 | 213 | 19.3 | 14.83 | 9.77 | KM Plot |
KIRP | rs865645 | chr5:79944104 | T/C | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs865646 | chr5:79942357 | G/T | 2.03E-6 | 211 | 19.45 | 14.32 | 11.2 | KM Plot |
KIRP | rs865647 | chr5:79942276 | T/C | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs872539 | chr17:47196993 | T/G | 2.74E-5 | 207 | 4.82 | 16.78 | 16.47 | KM Plot |
KIRP | rs899661 | chr19:42542466 | A/C | 0.000331 | 214 | 16.43 | 14.8 | 11.2 | KM Plot |